Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim52Q8CDV4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim52Q8CDV4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trim52Q8CDV4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trim52Q8CDV4 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm6415-201ENSMUST00000118488 348 ntBASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim52Q8CDV4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Gm13223-201ENSMUST00000118609 747 ntBASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Gm27618-201ENSMUST00000183671 60 ntBASIC18.75■□□□□ 0.59
Trim52Q8CDV4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.75■□□□□ 0.59
Trim52Q8CDV4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim52Q8CDV4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms