Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Gm19164-201ENSMUST00000210667 640 ntBASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vcpip1Q8CDG3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gm4459-201ENSMUST00000118750 468 ntBASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gm18622-201ENSMUST00000219361 595 ntBASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.42■□□□□ 0.22
Vcpip1Q8CDG3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vcpip1Q8CDG3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Mir8098-201ENSMUST00000184011 137 ntBASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gm5864-201ENSMUST00000202263 970 ntBASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Birc2-201ENSMUST00000054878 378 ntBASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
Vcpip1Q8CDG3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Vcpip1Q8CDG3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Gm8655-201ENSMUST00000221159 852 ntBASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vcpip1Q8CDG3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms