Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Q8CD60 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.06■□□□□ 0.16
Q8CD60 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.06■□□□□ 0.16
Q8CD60 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.06■□□□□ 0.16
Q8CD60 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.06■□□□□ 0.16
Q8CD60 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.06■□□□□ 0.16
Q8CD60 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.06■□□□□ 0.16
Q8CD60 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Q8CD60 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Q8CD60 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Q8CD60 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.05■□□□□ 0.16
Q8CD60 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.05■□□□□ 0.16
Q8CD60 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Q8CD60 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.05■□□□□ 0.16
Q8CD60 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.05■□□□□ 0.16
Q8CD60 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Q8CD60 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.05■□□□□ 0.16
Q8CD60 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Q8CD60 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Q8CD60 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Q8CD60 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.04■□□□□ 0.16
Q8CD60 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.04■□□□□ 0.16
Q8CD60 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.04■□□□□ 0.16
Q8CD60 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.04■□□□□ 0.16
Q8CD60 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.04■□□□□ 0.16
Q8CD60 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.04■□□□□ 0.16
Q8CD60 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.04■□□□□ 0.16
Q8CD60 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
Q8CD60 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Q8CD60 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Q8CD60 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Q8CD60 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q8CD60 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q8CD60 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.03■□□□□ 0.16
Q8CD60 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Q8CD60 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q8CD60 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Q8CD60 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Q8CD60 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms