Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alx1Q8C8B0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Alx1Q8C8B0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Alx1Q8C8B0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Alx1Q8C8B0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.77■□□□□ 0.43
Alx1Q8C8B0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Alx1Q8C8B0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gm9385-201ENSMUST00000117563 472 ntBASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx1Q8C8B0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Alx1Q8C8B0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx1Q8C8B0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms