Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Cfap54Q8C6S9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cfap54Q8C6S9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cfap54Q8C6S9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Gm44344-201ENSMUST00000200287 129 ntBASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cfap54Q8C6S9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap54Q8C6S9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Gm6266-201ENSMUST00000203844 806 ntBASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.49□□□□□ -0.09
Cfap54Q8C6S9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Mir1938-201ENSMUST00000158746 100 ntBASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gm8515-201ENSMUST00000194852 576 ntBASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Prob1-201ENSMUST00000097619 3021 ntBASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap54Q8C6S9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap54Q8C6S9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms