Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a6Q8C6K9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Mir8102-201ENSMUST00000184148 139 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Gm18049-201ENSMUST00000208909 581 ntBASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a6Q8C6K9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms