Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tsen54Q8C2A2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.81□□□□□ -0.36
Tsen54Q8C2A2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm11355-201ENSMUST00000121120 306 ntBASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm23634-201ENSMUST00000175071 91 ntBASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Gm10566-201ENSMUST00000086739 996 ntBASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms