Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Gm8344-201ENSMUST00000119813 856 ntBASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.82□□□□□ -0.36
Smim4Q8C1Q6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Gm12497-201ENSMUST00000138778 237 ntBASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim4Q8C1Q6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gm25745-201ENSMUST00000174945 133 ntBASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim4Q8C1Q6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms