Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cps1Q8C196 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cps1Q8C196 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cps1Q8C196 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cps1Q8C196 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC20.31■□□□□ 0.84
Cps1Q8C196 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.3■□□□□ 0.84
Cps1Q8C196 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cps1Q8C196 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC20.3■□□□□ 0.84
Cps1Q8C196 Gm9522-201ENSMUST00000182394 926 ntBASIC20.3■□□□□ 0.84
Cps1Q8C196 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC20.3■□□□□ 0.84
Cps1Q8C196 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.3■□□□□ 0.84
Cps1Q8C196 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cps1Q8C196 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cps1Q8C196 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cps1Q8C196 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.29■□□□□ 0.84
Cps1Q8C196 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm37230-201ENSMUST00000194491 818 ntBASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm9229-201ENSMUST00000222777 126 ntBASIC20.29■□□□□ 0.84
Cps1Q8C196 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cps1Q8C196 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cps1Q8C196 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cps1Q8C196 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Gm18018-201ENSMUST00000198273 408 ntBASIC20.28■□□□□ 0.84
Cps1Q8C196 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cps1Q8C196 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cps1Q8C196 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.27■□□□□ 0.84
Cps1Q8C196 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC20.27■□□□□ 0.84
Cps1Q8C196 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cps1Q8C196 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cps1Q8C196 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cps1Q8C196 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.27■□□□□ 0.83
Cps1Q8C196 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cps1Q8C196 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC20.27■□□□□ 0.83
Cps1Q8C196 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cps1Q8C196 Gm18624-201ENSMUST00000220966 658 ntBASIC20.27■□□□□ 0.83
Cps1Q8C196 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cps1Q8C196 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cps1Q8C196 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cps1Q8C196 Gm15163-201ENSMUST00000120749 1302 ntBASIC20.27■□□□□ 0.83
Cps1Q8C196 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.26■□□□□ 0.83
Cps1Q8C196 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.26■□□□□ 0.83
Cps1Q8C196 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms