Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps9d1Q8C190 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps9d1Q8C190 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Mir3081-201ENSMUST00000175305 84 ntBASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Gm27742-201ENSMUST00000184667 60 ntBASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps9d1Q8C190 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.3□□□□□ -0.12
Vps9d1Q8C190 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms