Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm28033-201ENSMUST00000184224 96 ntBASIC13.51□□□□□ -0.25
SprnQ8BWU1 Gm17807-201ENSMUST00000186869 298 ntBASIC13.51□□□□□ -0.25
SprnQ8BWU1 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.51□□□□□ -0.25
SprnQ8BWU1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SprnQ8BWU1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.5□□□□□ -0.25
SprnQ8BWU1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.5□□□□□ -0.25
SprnQ8BWU1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.5□□□□□ -0.25
SprnQ8BWU1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Gm17971-201ENSMUST00000190239 806 ntBASIC13.49□□□□□ -0.25
SprnQ8BWU1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.49□□□□□ -0.25
SprnQ8BWU1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SprnQ8BWU1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.48□□□□□ -0.25
SprnQ8BWU1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms