Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14057-201ENSMUST00000120631 482 ntBASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Gm5779-201ENSMUST00000218467 910 ntBASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp40Q8BWR4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.88■□□□□ 0.93
Usp40Q8BWR4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Gm2810-201ENSMUST00000118681 990 ntBASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Gm7063-201ENSMUST00000186840 981 ntBASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp40Q8BWR4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.86■□□□□ 0.93
Usp40Q8BWR4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp40Q8BWR4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp40Q8BWR4 Celf4-206ENSMUST00000224553 1729 ntBASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Gm11543-201ENSMUST00000120758 370 ntBASIC20.84■□□□□ 0.93
Usp40Q8BWR4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp40Q8BWR4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp40Q8BWR4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp40Q8BWR4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp40Q8BWR4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp40Q8BWR4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Usp40Q8BWR4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms