Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne3Q8BT60 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Gm14859-201ENSMUST00000117752 357 ntBASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpne3Q8BT60 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cpne3Q8BT60 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpne3Q8BT60 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpne3Q8BT60 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms