Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Gm13616-201ENSMUST00000120600 222 ntBASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Gm44872-201ENSMUST00000207864 420 ntBASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scfd1Q8BRF7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Gm6973-201ENSMUST00000117080 721 ntBASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scfd1Q8BRF7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Auts2-212ENSMUST00000178555 309 ntBASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scfd1Q8BRF7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Mir6956-201ENSMUST00000183598 62 ntBASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Gm10576-201ENSMUST00000191927 825 ntBASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scfd1Q8BRF7 Celf4-206ENSMUST00000224553 1729 ntBASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms