Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Gm14822-201ENSMUST00000122247 291 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Gm26308-201ENSMUST00000157768 69 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Gm4899-201ENSMUST00000178708 719 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Gm27300-201ENSMUST00000184085 97 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Gm27335-201ENSMUST00000184758 97 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nhlrc1Q8BR37 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nhlrc1Q8BR37 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gm25911-201ENSMUST00000157621 56 ntBASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nhlrc1Q8BR37 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms