Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smco3Q8BQM7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smco3Q8BQM7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms