Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sfr1Q8BP27 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sfr1Q8BP27 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Gm18489-201ENSMUST00000172565 551 ntBASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Gm5682-201ENSMUST00000173402 505 ntBASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sfr1Q8BP27 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Asic1-205ENSMUST00000228185 1818 ntBASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gm13036-201ENSMUST00000117799 748 ntBASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Gm15590-201ENSMUST00000078419 552 ntBASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sfr1Q8BP27 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Gm44771-201ENSMUST00000206975 626 ntBASIC15.53■□□□□ 0.08
Sfr1Q8BP27 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sfr1Q8BP27 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sfr1Q8BP27 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sfr1Q8BP27 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sfr1Q8BP27 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sfr1Q8BP27 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sfr1Q8BP27 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms