Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Gm11452-201ENSMUST00000122376 690 ntBASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Gm6089-201ENSMUST00000197666 938 ntBASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Csnk1a1Q8BK63 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gm28659-201ENSMUST00000188013 759 ntBASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Csnk1a1Q8BK63 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Gm5864-201ENSMUST00000202263 970 ntBASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Csnk1a1Q8BK63 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms