Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clrn3Q8BHH8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Gm14722-201ENSMUST00000118943 689 ntBASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Gm17971-201ENSMUST00000190239 806 ntBASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clrn3Q8BHH8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm4535-201ENSMUST00000182274 558 ntBASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Gm10355-201ENSMUST00000097146 517 ntBASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clrn3Q8BHH8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms