Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.03■□□□□ 0.16
Npas4Q8BGD7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.03■□□□□ 0.16
Npas4Q8BGD7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm13453-201ENSMUST00000118708 357 ntBASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Mir8102-201ENSMUST00000184148 139 ntBASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Gm18049-201ENSMUST00000208909 581 ntBASIC16.02■□□□□ 0.16
Npas4Q8BGD7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Npas4Q8BGD7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Npas4Q8BGD7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm5866-201ENSMUST00000177881 973 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm27920-201ENSMUST00000183953 96 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gm38294-201ENSMUST00000192831 381 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Npas4Q8BGD7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Npas4Q8BGD7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16■□□□□ 0.15
Npas4Q8BGD7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16■□□□□ 0.15
Npas4Q8BGD7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Gm25144-201ENSMUST00000179561 110 ntBASIC16■□□□□ 0.15
Npas4Q8BGD7 Gm25352-201ENSMUST00000179815 110 ntBASIC16■□□□□ 0.15
Npas4Q8BGD7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16■□□□□ 0.15
Npas4Q8BGD7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms