Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Gm45384-201ENSMUST00000210451 277 ntBASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trnp1Q80ZI1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Gm11478-201ENSMUST00000117851 599 ntBASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trnp1Q80ZI1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trnp1Q80ZI1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trnp1Q80ZI1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm22189-201ENSMUST00000103822 86 ntBASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm4875-201ENSMUST00000118257 786 ntBASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.08■□□□□ 0.32
Trnp1Q80ZI1 Gm14042-201ENSMUST00000120139 833 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms