Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp6nlQ80XC3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp6nlQ80XC3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp6nlQ80XC3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp6nlQ80XC3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp6nlQ80XC3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp6nlQ80XC3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp6nlQ80XC3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp6nlQ80XC3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp6nlQ80XC3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Gm16026-204ENSMUST00000162652 683 ntBASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp6nlQ80XC3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Gm2810-201ENSMUST00000118681 990 ntBASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp6nlQ80XC3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms