Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Gm23547-201ENSMUST00000158210 271 ntBASIC17.61■□□□□ 0.41
Prpf40bQ80W14 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf40bQ80W14 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm15427-201ENSMUST00000117288 531 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm12428-201ENSMUST00000119844 727 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm11745-201ENSMUST00000121669 448 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm45747-201ENSMUST00000212203 999 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm7787-201ENSMUST00000216858 688 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 App-207ENSMUST00000227737 2827 ntBASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf40bQ80W14 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Mir6977-201ENSMUST00000184960 64 ntBASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Gm43474-201ENSMUST00000196415 774 ntBASIC17.59■□□□□ 0.41
Prpf40bQ80W14 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf40bQ80W14 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Prpf40bQ80W14 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.58■□□□□ 0.41
Prpf40bQ80W14 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf40bQ80W14 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Prpf40bQ80W14 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf40bQ80W14 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Gm22175-201ENSMUST00000175007 78 ntBASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Mir6404-201ENSMUST00000183699 94 ntBASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Mir6990-201ENSMUST00000183724 91 ntBASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Prpf40bQ80W14 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms