Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Gm10499-201ENSMUST00000174094 934 ntBASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdh19Q80TF3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh19Q80TF3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Gm23935-201ENSMUST00000102303 57 ntBASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Gm24270-201ENSMUST00000102326 57 ntBASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms