Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.21■□□□□ 0.51
Sned1Q70E20 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sned1Q70E20 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sned1Q70E20 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sned1Q70E20 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.2■□□□□ 0.5
Sned1Q70E20 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Rarb-207ENSMUST00000225921 2756 ntBASIC18.2■□□□□ 0.5
Sned1Q70E20 Gm12957-201ENSMUST00000117835 377 ntBASIC18.2■□□□□ 0.5
Sned1Q70E20 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.2■□□□□ 0.5
Sned1Q70E20 Gm45098-201ENSMUST00000207179 657 ntBASIC18.2■□□□□ 0.5
Sned1Q70E20 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sned1Q70E20 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Mir1982-201ENSMUST00000157368 74 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 Gm2451-201ENSMUST00000199447 999 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 Gm10290-201ENSMUST00000200451 999 ntBASIC18.19■□□□□ 0.5
Sned1Q70E20 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.19■□□□□ 0.5
Sned1Q70E20 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Sned1Q70E20 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sned1Q70E20 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.18■□□□□ 0.5
Sned1Q70E20 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Gm28911-201ENSMUST00000188837 117 ntBASIC18.18■□□□□ 0.5
Sned1Q70E20 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.18■□□□□ 0.5
Sned1Q70E20 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.18■□□□□ 0.5
Sned1Q70E20 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sned1Q70E20 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.18■□□□□ 0.5
Sned1Q70E20 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sned1Q70E20 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.18■□□□□ 0.5
Sned1Q70E20 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sned1Q70E20 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Sned1Q70E20 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.17■□□□□ 0.5
Sned1Q70E20 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sned1Q70E20 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Gm12742-201ENSMUST00000117326 410 ntBASIC18.16■□□□□ 0.5
Sned1Q70E20 Gm12390-201ENSMUST00000117897 397 ntBASIC18.16■□□□□ 0.5
Sned1Q70E20 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC18.16■□□□□ 0.5
Sned1Q70E20 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.16■□□□□ 0.5
Sned1Q70E20 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms