Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RfflQ6ZQM0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RfflQ6ZQM0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RfflQ6ZQM0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RfflQ6ZQM0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RfflQ6ZQM0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.82□□□□□ -0.04
RfflQ6ZQM0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RfflQ6ZQM0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RfflQ6ZQM0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Carlr-201ENSMUST00000181515 2574 ntBASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RfflQ6ZQM0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RfflQ6ZQM0 Gm2274-201ENSMUST00000184539 609 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms