Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx55Q6ZPL9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx55Q6ZPL9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Gm7653-201ENSMUST00000214567 508 ntBASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx55Q6ZPL9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx55Q6ZPL9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms