Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.84□□□□□ -0.35
Rif1Q6PR54 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.84□□□□□ -0.35
Rif1Q6PR54 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Gm3961-201ENSMUST00000204425 994 ntBASIC12.84□□□□□ -0.35
Rif1Q6PR54 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rif1Q6PR54 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rif1Q6PR54 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rif1Q6PR54 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Rif1Q6PR54 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.83□□□□□ -0.35
Rif1Q6PR54 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.83□□□□□ -0.35
Rif1Q6PR54 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rif1Q6PR54 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.83□□□□□ -0.36
Rif1Q6PR54 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.83□□□□□ -0.36
Rif1Q6PR54 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rif1Q6PR54 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Gm14263-201ENSMUST00000117955 746 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Gm27341-201ENSMUST00000183570 106 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 Gm27501-201ENSMUST00000183599 107 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 Mir6392-201ENSMUST00000184924 108 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Gm18054-201ENSMUST00000207539 555 ntBASIC12.82□□□□□ -0.36
Rif1Q6PR54 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rif1Q6PR54 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm17794-201ENSMUST00000220252 955 ntBASIC12.81□□□□□ -0.36
Rif1Q6PR54 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.81□□□□□ -0.36
Rif1Q6PR54 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.81□□□□□ -0.36
Rif1Q6PR54 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms