Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm29541-201ENSMUST00000191351 678 ntBASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm43767-201ENSMUST00000198933 381 ntBASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm7730-201ENSMUST00000212486 454 ntBASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Snrnp40Q6PE01 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm13015-201ENSMUST00000118674 204 ntBASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Snrnp40Q6PE01 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms