Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cox11Q6P8I6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm9103-201ENSMUST00000119371 405 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Mir3081-201ENSMUST00000175305 84 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm27357-201ENSMUST00000183754 135 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm44430-201ENSMUST00000203376 995 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm18669-201ENSMUST00000216049 778 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cox11Q6P8I6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Rprl3-201ENSMUST00000157400 290 ntBASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cox11Q6P8I6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms