Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhga7Q6DD96 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Gm27867-201ENSMUST00000184778 125 ntBASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhga7Q6DD96 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Sybu-209ENSMUST00000228639 4113 ntBASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhga7Q6DD96 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gm7284-201ENSMUST00000131667 944 ntBASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gm19164-201ENSMUST00000210667 640 ntBASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Gm18622-201ENSMUST00000219361 595 ntBASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhga7Q6DD96 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms