Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcn1Q64347 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm7774-201ENSMUST00000200064 533 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm18057-201ENSMUST00000208220 503 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcn1Q64347 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.3■□□□□ 0.68
Clcn1Q64347 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Gm10154-201ENSMUST00000084445 354 ntBASIC19.3■□□□□ 0.68
Clcn1Q64347 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Clcn1Q64347 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcn1Q64347 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.29■□□□□ 0.68
Clcn1Q64347 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn1Q64347 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.28■□□□□ 0.68
Clcn1Q64347 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.28■□□□□ 0.68
Clcn1Q64347 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Gm27622-201ENSMUST00000183779 60 ntBASIC19.28■□□□□ 0.68
Clcn1Q64347 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Gm38294-201ENSMUST00000192831 381 ntBASIC19.28■□□□□ 0.68
Clcn1Q64347 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.28■□□□□ 0.68
Clcn1Q64347 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn1Q64347 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Clcn1Q64347 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.27■□□□□ 0.68
Clcn1Q64347 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.27■□□□□ 0.68
Clcn1Q64347 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm22065-201ENSMUST00000103753 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm22066-201ENSMUST00000103761 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm24932-201ENSMUST00000103763 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm24115-201ENSMUST00000103799 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm22190-201ENSMUST00000103827 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm22191-201ENSMUST00000103831 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm24721-201ENSMUST00000103849 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm28018-201ENSMUST00000103869 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm26399-201ENSMUST00000103937 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm25349-201ENSMUST00000177728 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm23616-201ENSMUST00000177797 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm25871-201ENSMUST00000177816 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm24752-201ENSMUST00000178240 110 ntBASIC19.27■□□□□ 0.68
Clcn1Q64347 Gm24496-201ENSMUST00000178287 110 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms