Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufa4Q62425 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.09□□□□□ -0.63
Ndufa4Q62425 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Mir5122-201ENSMUST00000175004 89 ntBASIC11.09□□□□□ -0.63
Ndufa4Q62425 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufa4Q62425 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.08□□□□□ -0.63
Ndufa4Q62425 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ndufa4Q62425 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.08□□□□□ -0.64
Ndufa4Q62425 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Gm20760-201ENSMUST00000179197 648 ntBASIC11.08□□□□□ -0.64
Ndufa4Q62425 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa4Q62425 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ndufa4Q62425 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ndufa4Q62425 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms