Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.77□□□□□ -0.53
Notch3Q61982 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Notch3Q61982 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Notch3Q61982 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Notch3Q61982 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.77□□□□□ -0.53
Notch3Q61982 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Notch3Q61982 Gm23547-201ENSMUST00000158210 271 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.76□□□□□ -0.53
Notch3Q61982 Gm5312-201ENSMUST00000203728 547 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Gm45167-201ENSMUST00000208007 322 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.76□□□□□ -0.53
Notch3Q61982 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Notch3Q61982 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.76□□□□□ -0.53
Notch3Q61982 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Gm20949-201ENSMUST00000206478 952 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Notch3Q61982 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.76□□□□□ -0.53
Notch3Q61982 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Notch3Q61982 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.75□□□□□ -0.53
Notch3Q61982 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.75□□□□□ -0.53
Notch3Q61982 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.75□□□□□ -0.53
Notch3Q61982 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.75□□□□□ -0.53
Notch3Q61982 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.75□□□□□ -0.53
Notch3Q61982 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Notch3Q61982 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.74□□□□□ -0.53
Notch3Q61982 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Notch3Q61982 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Notch3Q61982 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.74□□□□□ -0.53
Notch3Q61982 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Notch3Q61982 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.74□□□□□ -0.53
Notch3Q61982 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.74□□□□□ -0.53
Notch3Q61982 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Notch3Q61982 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms