Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm2213-201ENSMUST00000197485 688 ntBASIC11.26□□□□□ -0.61
Foxc1Q61572 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.26□□□□□ -0.61
Foxc1Q61572 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Foxc1Q61572 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc1Q61572 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm8825-201ENSMUST00000182565 998 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm4518-201ENSMUST00000182638 718 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm36943-201ENSMUST00000194422 282 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Foxc1Q61572 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.25□□□□□ -0.61
Foxc1Q61572 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc1Q61572 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Foxc1Q61572 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms