Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Gm37055-201ENSMUST00000191866 133 ntBASIC14.36□□□□□ -0.11
Sox17Q61473 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.36□□□□□ -0.11
Sox17Q61473 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox17Q61473 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox17Q61473 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Sox17Q61473 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox17Q61473 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox17Q61473 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.36□□□□□ -0.11
Sox17Q61473 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox17Q61473 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox17Q61473 Gm21559-201ENSMUST00000220638 855 ntBASIC14.35□□□□□ -0.11
Sox17Q61473 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Gm8587-201ENSMUST00000076538 843 ntBASIC14.35□□□□□ -0.11
Sox17Q61473 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox17Q61473 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sox17Q61473 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox17Q61473 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox17Q61473 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox17Q61473 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sox17Q61473 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sox17Q61473 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.34□□□□□ -0.11
Sox17Q61473 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox17Q61473 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox17Q61473 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sox17Q61473 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox17Q61473 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox17Q61473 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox17Q61473 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.33□□□□□ -0.12
Sox17Q61473 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Gm45058-201ENSMUST00000205810 766 ntBASIC14.33□□□□□ -0.12
Sox17Q61473 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.33□□□□□ -0.12
Sox17Q61473 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.33□□□□□ -0.12
Sox17Q61473 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Sox17Q61473 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Sox17Q61473 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox17Q61473 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox17Q61473 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox17Q61473 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Sox17Q61473 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Carlr-201ENSMUST00000181515 2574 ntBASIC14.32□□□□□ -0.12
Sox17Q61473 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sox17Q61473 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms