Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.1□□□□□ -0.15
Clcn4Q61418 Gm18195-201ENSMUST00000207604 706 ntBASIC14.1□□□□□ -0.15
Clcn4Q61418 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn4Q61418 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.1□□□□□ -0.15
Clcn4Q61418 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn4Q61418 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.1□□□□□ -0.15
Clcn4Q61418 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clcn4Q61418 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clcn4Q61418 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.09□□□□□ -0.15
Clcn4Q61418 Gm13884-201ENSMUST00000118103 829 ntBASIC14.09□□□□□ -0.15
Clcn4Q61418 Gm25406-201ENSMUST00000157599 105 ntBASIC14.09□□□□□ -0.15
Clcn4Q61418 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.09□□□□□ -0.15
Clcn4Q61418 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn4Q61418 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn4Q61418 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clcn4Q61418 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Clcn4Q61418 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clcn4Q61418 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Clcn4Q61418 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Clcn4Q61418 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Gm12644-201ENSMUST00000119935 606 ntBASIC14.08□□□□□ -0.16
Clcn4Q61418 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clcn4Q61418 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.08□□□□□ -0.16
Clcn4Q61418 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn4Q61418 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Clcn4Q61418 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Clcn4Q61418 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.07□□□□□ -0.16
Clcn4Q61418 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn4Q61418 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Clcn4Q61418 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms