Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ift88Q61371 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ift88Q61371 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ift88Q61371 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ift88Q61371 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.93■□□□□ 0.3
Ift88Q61371 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 Gm18622-201ENSMUST00000219361 595 ntBASIC16.93■□□□□ 0.3
Ift88Q61371 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ift88Q61371 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ift88Q61371 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ift88Q61371 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Ift88Q61371 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ift88Q61371 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.92■□□□□ 0.3
Ift88Q61371 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ift88Q61371 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.92■□□□□ 0.3
Ift88Q61371 Gm15165-201ENSMUST00000118140 502 ntBASIC16.92■□□□□ 0.3
Ift88Q61371 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.92■□□□□ 0.3
Ift88Q61371 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.92■□□□□ 0.3
Ift88Q61371 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.92■□□□□ 0.3
Ift88Q61371 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ift88Q61371 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Grk6-207ENSMUST00000225925 2769 ntBASIC16.92■□□□□ 0.3
Ift88Q61371 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.92■□□□□ 0.3
Ift88Q61371 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ift88Q61371 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ift88Q61371 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ift88Q61371 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.91■□□□□ 0.3
Ift88Q61371 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Ift88Q61371 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Ift88Q61371 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Ift88Q61371 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ift88Q61371 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.91■□□□□ 0.3
Ift88Q61371 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ift88Q61371 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ift88Q61371 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ift88Q61371 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ift88Q61371 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.9■□□□□ 0.3
Ift88Q61371 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.9■□□□□ 0.3
Ift88Q61371 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Gm8344-201ENSMUST00000119813 856 ntBASIC16.9■□□□□ 0.3
Ift88Q61371 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.9■□□□□ 0.3
Ift88Q61371 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ift88Q61371 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ift88Q61371 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ift88Q61371 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ift88Q61371 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms