Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.86■□□□□ 0.29
Col11a1Q61245 Gm15824-201ENSMUST00000119516 955 ntBASIC16.86■□□□□ 0.29
Col11a1Q61245 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.86■□□□□ 0.29
Col11a1Q61245 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col11a1Q61245 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.86■□□□□ 0.29
Col11a1Q61245 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Gm13464-201ENSMUST00000119418 935 ntBASIC16.86■□□□□ 0.29
Col11a1Q61245 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.86■□□□□ 0.29
Col11a1Q61245 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col11a1Q61245 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col11a1Q61245 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.85■□□□□ 0.29
Col11a1Q61245 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col11a1Q61245 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col11a1Q61245 Mir6392-201ENSMUST00000184924 108 ntBASIC16.85■□□□□ 0.29
Col11a1Q61245 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.85■□□□□ 0.29
Col11a1Q61245 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col11a1Q61245 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Mir1894-201ENSMUST00000122802 81 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.84■□□□□ 0.29
Col11a1Q61245 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Gm45453-201ENSMUST00000211758 853 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 Mir125a-201ENSMUST00000083545 68 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Celf4-206ENSMUST00000224553 1729 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.84■□□□□ 0.29
Col11a1Q61245 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col11a1Q61245 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col11a1Q61245 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col11a1Q61245 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col11a1Q61245 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Col11a1Q61245 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.83■□□□□ 0.29
Col11a1Q61245 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col11a1Q61245 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Col11a1Q61245 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col11a1Q61245 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Col11a1Q61245 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.83■□□□□ 0.28
Col11a1Q61245 Gm11425-201ENSMUST00000119608 498 ntBASIC16.83■□□□□ 0.28
Col11a1Q61245 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms