Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm5479-201ENSMUST00000160578 435 ntBASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Gm27437-201ENSMUST00000183429 107 ntBASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scaf1Q5U4C3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scaf1Q5U4C3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scaf1Q5U4C3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scaf1Q5U4C3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scaf1Q5U4C3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Gm5566-201ENSMUST00000116118 459 ntBASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scaf1Q5U4C3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scaf1Q5U4C3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Mir6977-201ENSMUST00000184960 64 ntBASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scaf1Q5U4C3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms