Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav7-2Q5R1I3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Gm15372-201ENSMUST00000120729 834 ntBASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Gm6257-201ENSMUST00000163864 910 ntBASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav7-2Q5R1I3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Trav7-2Q5R1I3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms