Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-4Q5R1I0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm17271-201ENSMUST00000165535 355 ntBASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm10175-201ENSMUST00000086013 645 ntBASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6d-4Q5R1I0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gm5867-201ENSMUST00000063197 592 ntBASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms