Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav7d-4Q5R1H9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7d-4Q5R1H9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Gm7367-201ENSMUST00000057611 492 ntBASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7d-4Q5R1H9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms