Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8d-1Q5R1H8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Gm36967-201ENSMUST00000193814 266 ntBASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Gm14859-201ENSMUST00000117752 357 ntBASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Gm6623-201ENSMUST00000173570 544 ntBASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav8d-1Q5R1H8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms