Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Bdp1Q571C7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.4■□□□□ 0.06
Bdp1Q571C7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.4■□□□□ 0.06
Bdp1Q571C7 Gm15678-201ENSMUST00000117573 960 ntBASIC15.4■□□□□ 0.06
Bdp1Q571C7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Bdp1Q571C7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.39■□□□□ 0.05
Bdp1Q571C7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Bdp1Q571C7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Gm46209-201ENSMUST00000217912 553 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Bdp1Q571C7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Bdp1Q571C7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.38■□□□□ 0.05
Bdp1Q571C7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.37■□□□□ 0.05
Bdp1Q571C7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms