Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm14701-201ENSMUST00000117156 348 ntBASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf38aQ4FK66 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Gm11745-201ENSMUST00000121669 448 ntBASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf38aQ4FK66 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Prpf38aQ4FK66 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf38aQ4FK66 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Gm44335-201ENSMUST00000196879 141 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Gm44297-201ENSMUST00000198304 141 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Gm44346-201ENSMUST00000198851 141 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf38aQ4FK66 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms