Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim80Q3V061 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim80Q3V061 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim80Q3V061 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim80Q3V061 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim80Q3V061 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.82■□□□□ 0.12
Trim80Q3V061 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim80Q3V061 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim80Q3V061 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.82■□□□□ 0.12
Trim80Q3V061 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim80Q3V061 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Birc2-201ENSMUST00000054878 378 ntBASIC15.82■□□□□ 0.12
Trim80Q3V061 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim80Q3V061 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim80Q3V061 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim80Q3V061 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Gm43514-201ENSMUST00000198852 424 ntBASIC15.81■□□□□ 0.12
Trim80Q3V061 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.81■□□□□ 0.12
Trim80Q3V061 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.81■□□□□ 0.12
Trim80Q3V061 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim80Q3V061 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim80Q3V061 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Gm28659-201ENSMUST00000188013 759 ntBASIC15.8■□□□□ 0.12
Trim80Q3V061 Gm44450-201ENSMUST00000199528 114 ntBASIC15.8■□□□□ 0.12
Trim80Q3V061 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim80Q3V061 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim80Q3V061 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Trim80Q3V061 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.8■□□□□ 0.12
Trim80Q3V061 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms