Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Brf2Q3UAW9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm9103-201ENSMUST00000119371 405 ntBASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Brf2Q3UAW9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Brf2Q3UAW9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.4□□□□□ -0.1
Brf2Q3UAW9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Brf2Q3UAW9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms