Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Gm18049-201ENSMUST00000208909 581 ntBASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim7Q3TJD7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim7Q3TJD7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Gm18766-201ENSMUST00000189811 808 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Gm18187-201ENSMUST00000196476 984 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Gm7775-201ENSMUST00000218871 853 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim7Q3TJD7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Gm27680-201ENSMUST00000184192 160 ntBASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim7Q3TJD7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Gm27838-201ENSMUST00000184829 128 ntBASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pdlim7Q3TJD7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms