Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Celf4-206ENSMUST00000224553 1729 ntBASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cul4aQ3TCH7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cul4aQ3TCH7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cul4aQ3TCH7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cul4aQ3TCH7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms